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| First Round Draft Pick History |
| 1 | 6 | 6 | 2025 | Annual Draft | P | Yoshinobu | Yamamoto | MLB |
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| 1 | 3 | 3 | 2024 | Annual Draft | P | Tanner | Bibee | MLB |
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| 1 | 6 | 6 | 2023 | Annual Draft | P | Hunter | Greene | MLB |
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| Complete Draft History |
| 1 | 6 | 6 | 2025 | Annual Draft | P | Yoshinobu | Yamamoto | MLB |
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| 2 | 2 | 18 | 2025 | Annual Draft | 2B+ | Jackson | Holliday | MLB |
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| 3 | 6 | 38 | 2025 | Annual Draft | OF | Jung Hoo | Lee | MLB |
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| 4 | 2 | 50 | 2025 | Annual Draft | P | A.J. | Puk | MLB |
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| 5 | 6 | 70 | 2025 | Annual Draft | P | Porter | Hodge | MLB |
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| 6 | 2 | 82 | 2025 | Annual Draft | P | Ben | Joyce | MLB |
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| 7 | 6 | 102 | 2025 | Annual Draft | OF | Parker | Meadows | MLB |
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| 8 | 2 | 114 | 2025 | Annual Draft | C | Joey | Bart | MLB |
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| 9 | 2 | 130 | 2025 | Annual Draft | 3B+ | Santiago | Espinal | MLB |
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| 10 | 2 | 146 | 2025 | Annual Draft | OF | Trevor | Larnach | MLB |
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| 11 | 2 | 162 | 2025 | Annual Draft | P | Michael | Tonkin | MLB |
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| 12 | 2 | 178 | 2025 | Annual Draft | P | Colin | Holderman | MLB |
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| 13 | 2 | 194 | 2025 | Annual Draft | 2B+ | Will | Wagner | MLB |
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| 14 | 2 | 210 | 2025 | Annual Draft | P | Jonathan | Cannon | MLB |
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| 1 | 3 | 3 | 2024 | Annual Draft | P | Tanner | Bibee | MLB |
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| 2 | 1 | 17 | 2024 | Annual Draft | 1B+ | Christian | Encarnacion | MLB |
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| 3 | 1 | 33 | 2024 | Annual Draft | C | Patrick | Bailey | MLB |
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| 4 | 1 | 49 | 2024 | Annual Draft | OF | Heston | Kjerstad | MLB |
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| 5 | 1 | 65 | 2024 | Annual Draft | 3B+ | Noelvi | Marte | MLB |
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| 6 | 1 | 81 | 2024 | Annual Draft | 1B+ | Alex | Kirilloff | MLB |
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| 7 | 1 | 97 | 2024 | Annual Draft | P | Brandon | Williamson | MLB |
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| 8 | 1 | 113 | 2024 | Annual Draft | P | Ryan | Feltner | MLB |
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| 9 | 1 | 129 | 2024 | Annual Draft | P | Julian | Merryweather | MLB |
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| 10 | 1 | 145 | 2024 | Annual Draft | P | Carmen | Mlodzinski | MLB |
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| 11 | 1 | 161 | 2024 | Annual Draft | P | Mason | Miller | MLB |
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| 12 | 1 | 177 | 2024 | Annual Draft | P | Jose | Soriano | MLB |
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| 13 | 1 | 193 | 2024 | Annual Draft | P | Jake | Diekman | MLB |
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| 14 | 1 | 209 | 2024 | Annual Draft | C | Miguel | Amaya | MLB |
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| 15 | 1 | 225 | 2024 | Annual Draft | OF+ | Ceddanne | Rafaela | MLB |
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| 1 | 6 | 6 | 2023 | Annual Draft | P | Hunter | Greene | MLB |
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| 2 | 3 | 19 | 2023 | Annual Draft | OF | Seiya | Suzuki | MLB |
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| 3 | 3 | 35 | 2023 | Annual Draft | C+ | MJ | Melendez | MLB |
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| 4 | 3 | 51 | 2023 | Annual Draft | P | MacKenzie | Gore | MLB |
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| 5 | 3 | 67 | 2023 | Annual Draft | OF+ | Christopher | Morel | MLB |
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| 6 | 3 | 83 | 2023 | Annual Draft | P | Graham | Ashcraft | MLB |
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| 7 | 3 | 99 | 2023 | Annual Draft | 3B+ | Spencer | Steer | MLB |
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| 8 | 3 | 115 | 2023 | Annual Draft | SS+ | Royce | Lewis | MLB |
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| 9 | 3 | 131 | 2023 | Annual Draft | OF | Garrett | Mitchell | MLB |
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| 10 | 3 | 147 | 2023 | Annual Draft | P | Drey | Jameson | MLB |
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| 11 | 3 | 163 | 2023 | Annual Draft | OF | Drew | Waters | MLB |
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| 12 | 3 | 179 | 2023 | Annual Draft | OF+ | Juan | Yepez | MLB |
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| 13 | 3 | 195 | 2023 | Annual Draft | OF+ | Ji Hwan | Bae | MLB |
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| 14 | 3 | 211 | 2023 | Annual Draft | OF | JJ | Bleday | MLB |
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| 15 | 3 | 227 | 2023 | Annual Draft | SS | Ezequiel | Tovar | MLB |
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Minnesota Muskies (MIN), 2020 - 2020
